miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Ascaris suum



ABOUT THIS RECORD

ID: MNEST009092
species: Ascaris suum
miRNA family: mir-1420
source: miRNEST

Taxonomy by NCBI:
Ascaris suum Ascaris Ascarididae Ascaridoidea Ascaridida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AAGGTGCGACTGGATCGTATT

miRNA*
TATCGTCCAGTAACGCTATCT

mismatches: 4
bulges: 0

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pre-miRNA
AGCTGAAGGAGAAGGTGCGACTGGATCGTATTTGGATTGCGTCCAACAATTGCCCTCATTCGTTTCTCATCGGATGGCCTATCAGCAATTTTATTGCACA
TTTCTCGTGAGCGTCAATTTGCATTCTGCTTGCATCAGTATCGTCCAGTAACGCTATCTTCTAAAGA


dot-bracket secondary structure
..((..((((((.((((..(((((((.((((((((((...)))))..((((((..(((((((........))))))).......))))))((..(((.((
(.....))).)))..))..((((.......))))..))))).)))))))..)))).))))))..)).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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